Giovanni Bottegoni: search on Z-Library

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1

Addendum to BiKi Life Sciences: A New Suite for Molecular Dynamics and Related Methods in Drug Discovery

Decherchi, Sergio, Bottegoni, Giovanni, Spitaleri, Andrea, Rocchia, Walter, Cavalli, Andrea

Journal:

Journal of Chemical Information and Modeling

Year:

2018

Language:

english

File:

PDF, 325 KB

english, 2018

2

Multitarget drug design strategy in Alzheimer's disease: focus on cholinergic transmission and amyloid-β aggregation

Simoni, Elena, Bartolini, Manuela, Abu, Izuddin F, Blockley, Alix, Gotti, Cecilia, Bottegoni, Giovanni, Caporaso, Roberta, Bergamini, Christian, Andrisano, Vincenza, Cavalli, Andrea, Mellor, Ian R, Mi

Journal:

Future Medicinal Chemistry

Year:

2017

Language:

english

File:

PDF, 2.36 MB

english, 2017

3

Design of Hybrid Molecules for Drug Development || Computational Methods in Multitarget Drug Discovery

Bottegoni, Giovanni

Year:

2017

Language:

english

File:

PDF, 2.48 MB

english, 2017

4

BiKi Life Sciences: a New Suite for Molecular Dynamics and Related Methods in Drug Discovery

Decherchi, Sergio, Bottegoni, Giovanni, spitaleri, andrea, Rocchia, Walter, Cavalli, Andrea

Journal:

Journal of Chemical Information and Modeling

Year:

2018

Language:

english

File:

PDF, 501 KB

english, 2018

5

Photon energy dependence of photo-induced inverse spin-Hall effect in Pt/GaAs and Pt/Ge

Isella, Giovanni, Bottegoni, Federico, Ferrari, Alberto, Finazzi, Marco, Ciccacci, Franco

Journal:

Applied Physics Letters

Year:

2015

Language:

english

File:

PDF, 876 KB

english, 2015

6

[IEEE 2011 IEEE 8th International Conference on Group IV Photonics (GFP) - London, United Kingdom (2011.09.14-2011.09.16)] 8th IEEE International Conference on Group IV Photonics - Spin polarized photoemission from strained Ge epilayers grown by low-energy plasma-enhanced CVD (LEPECVD)

Cecchi, Stefano, Bottegoni, Federico, Ferrari, Alberto, Chrastina, Daniel, Isella, Giovanni, Ciccacci, Franco

Year:

2011

Language:

english

File:

PDF, 448 KB

english, 2011

7

(38) Computational approaches to the study of dual-site and peripheral site binding ache inhibitors

Maurizio Recanatini, Andrea Cavalli, Giovanni Bottegoni

Journal:

Chemico-Biological Interactions

Year:

2005

Language:

english

File:

PDF, 88 KB

english, 2005

8

Role of phosphorylated Thr160 for the activation of the CDK2/Cyclin A complex

Marco De Vivo, Andrea Cavalli, Giovanni Bottegoni, Paolo Carloni, Maurizio Recanatini

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2006

Language:

english

File:

PDF, 704 KB

english, 2006

9

Corrigendum: A catalytically silent FAAH-1 variant drives anandamide transport in neurons

Fu, Jin, Bottegoni, Giovanni, Sasso, Oscar, Bertorelli, Rosalia, Rocchia, Walter, Masetti, Matteo, Guijarro, Ana, Lodola, Alessio, Armirotti, Andrea, Garau, Gianpiero, Bandiera, Tiziano, Reggiani, Ang

Journal:

Nature Neuroscience

Year:

2013

Language:

english

File:

PDF, 87 KB

english, 2013

10

Structure-Based Predictions of Activity Cliffs

Husby, Jarmila, Bottegoni, Giovanni, Kufareva, Irina, Abagyan, Ruben, Cavalli, Andrea

Journal:

Journal of Chemical Information and Modeling

Year:

2015

Language:

english

File:

PDF, 1.73 MB

english, 2015

11

SPIE Proceedings [SPIE SPIE NanoScience + Engineering - San Diego, California, USA (Sunday 12 August 2012)] Spintronics V - Optical spin injection and spin lifetime in Ge heterostructures

Pezzoli, Fabio, Bottegoni, Federico, Trivedi, Dhara, Ciccacci, Franco, Giorgioni, Anna, Li, Pengki, Cecchi, Stefano, Grilli, Emanuele, Song, Yang, Guzzi, Mario, Dery, Hanan, Isella, Giovanni, Drouhin,

Year:

2012

Language:

english

File:

PDF, 623 KB

english, 2012

12

Optical spin orientation in group-IV heterostructures

Ferrari, Alberto, Bottegoni, Federico, Cecchi, Stefano, Isella, Giovanni, Ciccacci, Franco

Journal:

Journal of Applied Physics

Year:

2013

Language:

english

File:

PDF, 357 KB

english, 2013

13

AIP Conference Proceedings [AIP THE PHYSICS OF SEMICONDUCTORS: Proceedings of the 31st International Conference on the Physics of Semiconductors (ICPS) 2012 - Zurich, Switzerland (29 July–3 August 2012)] - Tailoring the spin polarization in Ge/SiGe multiple quantum wells

Giorgioni, Anna, Pezzoli, Fabio, Bottegoni, Federico, Cecchi, Stefano, Gatti, Eleonora, Trivedi, Dhara, Li, Pengki, Song, Yang, Grilli, Emanuele, Ciccacci, Franco, Isella, Giovanni, Dery, Hanan, Guzzi

Year:

2013

Language:

english

File:

PDF, 719 KB

english, 2013

14

Structure of the complement C5a receptor bound to the extra-helical antagonist NDT9513727

Robertson, Nathan, Rappas, Mathieu, Doré, Andrew S., Brown, Jason, Bottegoni, Giovanni, Koglin, Markus, Cansfield, Julie, Jazayeri, Ali, Cooke, Robert M., Marshall, Fiona H.

Journal:

Year:

2018

Language:

english

File:

PDF, 6.16 MB

english, 2018

15

A Comparative Study on the Application of Hierarchical−Agglomerative Clustering Approaches to Organize Outputs of Reiterated Docking Runs

Bottegoni, Giovanni, Cavalli, Andrea, Recanatini, Maurizio

Journal:

Journal of Chemical Information and Modeling

Year:

2006

Language:

english

File:

PDF, 389 KB

english, 2006

16

Applying a multitarget rational drug design strategy: the first set of modulators with potent and balanced activity toward dopamine D3 receptor and fatty acid amide hydrolase

De Simone, Alessio, Ruda, Gian Filippo, Albani, Clara, Tarozzo, Glauco, Bandiera, Tiziano, Piomelli, Daniele, Cavalli, Andrea, Bottegoni, Giovanni

Journal:

Chemical Communications

Year:

2014

Language:

english

File:

PDF, 1.19 MB

english, 2014

17

The Role of Molecular Dynamics and Related Methods in Drug Discovery

De Vivo, Marco, Masetti, Matteo, Bottegoni, Giovanni, Cavalli, Andrea

Journal:

Journal of Medicinal Chemistry

Year:

2016

Language:

english

File:

PDF, 2.44 MB

english, 2016

18

A catalytically silent FAAH-1 variant drives anandamide transport in neurons

Fu, Jin, Bottegoni, Giovanni, Sasso, Oscar, Bertorelli, Rosalia, Rocchia, Walter, Masetti, Matteo, Guijarro, Ana, Lodola, Alessio, Armirotti, Andrea, Garau, Gianpiero, Bandiera, Tiziano, Reggiani, Ang

Journal:

Nature Neuroscience

Year:

2011

Language:

english

File:

PDF, 808 KB

english, 2011

19

Multitarget Compounds for Bipolar Disorder: From Rational Design to Preliminary Pharmacokinetic Evaluation

Di Martino, Rita Maria Concetta, Bottegoni, Giovanni, Seghetti, Francesca, Russo, Debora, Penna, Ilaria, De Simone, Alessio, Ottonello, Giuliana, Mandrup Bertozzi, Sine, Armirotti, Andrea, Bandiera, T

Journal:

Year:

2020

File:

PDF, 1.45 MB

2020

20

In silico antitarget screening

Maurizio Recanatini, Giovanni Bottegoni, Andrea Cavalli

Journal:

Drug Discovery Today: Technologies

Year:

2004

Language:

english

File:

PDF, 177 KB

english, 2004

21

Cyclin-dependent kinases: bridging their structure and function through computations

De Vivo, Marco, Bottegoni, Giovanni, Berteotti, Anna, Recanatini, Maurizio, Gervasio, Francesco Luigi, Cavalli, Andrea

Journal:

Future Medicinal Chemistry

Year:

2011

Language:

english

File:

PDF, 3.69 MB

english, 2011

22

Systematic Exploitation of Multiple Receptor Conformations for Virtual Ligand Screening

Bottegoni, Giovanni, Rocchia, Walter, Rueda, Manuel, Abagyan, Ruben, Cavalli, Andrea, Gasset, Maria

Journal:

Year:

2011

Language:

english

File:

PDF, 2.14 MB

english, 2011

23

Recipes for the Selection of Experimental Protein Conformations for Virtual Screening

Bottegoni, Giovanni, Abagyan, Ruben, Rueda, Manuel

Journal:

Journal of Chemical Information and Modeling

Year:

2010

Language:

english

File:

PDF, 198 KB

english, 2010

24

Synthesis, Biological Evaluation, and 3D QSAR Study of 2-Methyl-4-oxo-3-oxetanylcarbamic Acid Esters as N -Acylethanolamine Acid Amidase (NAAA) Inhibitors

Ponzano, Stefano, Berteotti, Anna, Petracca, Rita, Vitale, Romina, Mengatto, Luisa, Bandiera, Tiziano, Cavalli, Andrea, Piomelli, Daniele, Bertozzi, Fabio, Bottegoni, Giovanni

Journal:

Journal of Medicinal Chemistry

Year:

2014

Language:

english

File:

PDF, 1.50 MB

english, 2014

25

Development and Application of a Virtual Screening Protocol for the Identification of Multitarget Fragments

Bottegoni, Giovanni, Veronesi, Marina, Bisignano, Paola, Kacker, Puneet, Favia, Angelo D., Cavalli, Andrea

Journal:

Year:

2016

Language:

english

File:

PDF, 1.73 MB

english, 2016

26

Pyrazole-Based Acid Ceramidase Inhibitors: Design, Synthesis, and Structure–Activity Relationships

Diamanti, Eleonora, Bottegoni, Giovanni, Goldoni, Luca, Realini, Natalia, Pagliuca, Chiara, Bertozzi, Fabio, Piomelli, Daniele, Pizzirani, Daniela

Journal:

Year:

2016

Language:

english

File:

PDF, 2.02 MB

english, 2016

27

SPIE Proceedings [SPIE SPIE NanoScience + Engineering - San Diego, California, USA (Sunday 21 August 2011)] Spintronics IV - Optical spin injection in SiGe heterostructures

Isella, Giovanni, Drouhin, Henri-Jean M., Wegrowe, Jean-Eric, Bottegoni, Federico, Pezzoli, Fabio, Razeghi, Manijeh, Cecchi, Stefano, Gatti, Eleonora, Chrastina, Daniel, Grilli, Emanuele, Guzzi, Mario

Year:

2011

Language:

english

File:

PDF, 333 KB

english, 2011

28

Multi-target dopamine D3 receptor modulators: Actionable knowledge for drug design from molecular dynamics and machine learning

Ferraro, Mariarosaria, Decherchi, Sergio, De Simone, Alessio, Recanatini, Maurizio, Cavalli, Andrea, Bottegoni, Giovanni

Journal:

European Journal of Medicinal Chemistry

Year:

2019

File:

PDF, 5.01 MB

2019

29

Combining Galantamine and Memantine in Multitargeted, New Chemical Entities Potentially Useful in Alzheimer’s Disease

Simoni, Elena, Daniele, Simona, Bottegoni, Giovanni, Pizzirani, Daniela, Trincavelli, Maria L., Goldoni, Luca, Tarozzo, Glauco, Reggiani, Angelo, Martini, Claudia, Piomelli, Daniele, Melchiorre, Carlo

Journal:

Journal of Medicinal Chemistry

Year:

2012

Language:

english

File:

PDF, 444 KB

english, 2012

30

Kinetic and Structural Insights into the Mechanism of Binding of Sulfonamides to Human Carbonic Anhydrase by Computational and Experimental Studies

Gaspari, Roberto, Rechlin, Chris, Heine, Andreas, Bottegoni, Giovanni, Rocchia, Walter, Schwarz, Daniel, Bomke, Joerg, Gerber, Hans-Dieter, Klebe, Gerhard, Cavalli, Andrea

Journal:

Journal of Medicinal Chemistry

Year:

2015

Language:

english

File:

PDF, 1.36 MB

english, 2015

31

Small Molecule Aurora Kinases Inhibitors

Garuti, Laura, Roberti, Marinella, Bottegoni, Giovanni

Journal:

Current Medicinal Chemistry

Year:

2009

Language:

english

File:

PDF, 459 KB

english, 2009

32

Inside Cover: Development and Application of a Virtual Screening Protocol for the Identification of Multitarget Fragments (ChemMedChem 12/2016)

Bottegoni, Giovanni, Veronesi, Marina, Bisignano, Paola, Kacker, Puneet, Favia, Angelo D., Cavalli, Andrea

Journal:

Year:

2016

File:

PDF, 913 KB

2016

33

Protein-ligand docking

Bottegoni, Giovanni

Journal:

Frontiers in Bioscience

Year:

2011

Language:

english

File:

PDF, 489 KB

english, 2011

34

Fluorinated benzophenone derivatives: Balanced multipotent agents for Alzheimer's disease

Belluti, Federica, De Simone, Angela, Tarozzi, Andrea, Bartolini, Manuela, Djemil, Alice, Bisi, Alessandra, Gobbi, Silvia, Montanari, Serena, Cavalli, Andrea, Andrisano, Vincenza, Bottegoni, Giovanni,

Journal:

European Journal of Medicinal Chemistry

Year:

2014

Language:

english

File:

PDF, 1.42 MB

english, 2014

35

Describing the Conformational Landscape of Small Organic Molecules through Gaussian Mixtures in Dihedral Space

Pisani, Pasquale, Piro, Paolo, Decherchi, Sergio, Bottegoni, Giovanni, Sona, Diego, Murino, Vittorio, Rocchia, Walter, Cavalli, Andrea

Journal:

Journal of Chemical Theory and Computation

Year:

2014

Language:

english

File:

PDF, 2.71 MB

english, 2014

36

Benzophenone-based derivatives: A novel series of potent and selective dual inhibitors of acetylcholinesterase and acetylcholinesterase-induced beta-amyloid aggregation

Federica Belluti, Manuela Bartolini, Giovanni Bottegoni, Alessandra Bisi, Andrea Cavalli, Vincenza Andrisano, Angela Rampa

Journal:

European Journal of Medicinal Chemistry

Year:

2011

Language:

english

File:

PDF, 670 KB

english, 2011

37

A Computational Study of the Binding of Propidium to the Peripheral Anionic Site of Human Acetylcholinesterase

Cavalli, Andrea, Bottegoni, Giovanni, Raco, Caterina, De Vivo, Marco, Recanatini, Maurizio

Journal:

Journal of Medicinal Chemistry

Year:

2004

Language:

english

File:

PDF, 506 KB

english, 2004

38

Optical Orientation and Inverse Spin Hall Effect as Effective Tools to Investigate Spin-Dependent Diffusion

Finazzi, Marco, Bottegoni, Federico, Zucchetti, Carlo, Bollani, Monica, Ballabio, Andrea, Frigerio, Jacopo, Rortais, Fabien, Vergnaud, Céline, Marty, Alain, Jamet, Matthieu, Isella, Giovanni, Ciccacci

Journal:

Year:

2016

Language:

english

File:

PDF, 352 KB

english, 2016

39

Discovery of a New Class of Highly Potent Inhibitors of Acid Ceramidase: Synthesis and Structure–Activity Relationship (SAR)

Pizzirani, Daniela, Pagliuca, Chiara, Realini, Natalia, Branduardi, Davide, Bottegoni, Giovanni, Mor, Marco, Bertozzi, Fabio, Scarpelli, Rita, Piomelli, Daniele, Bandiera, Tiziano

Journal:

Journal of Medicinal Chemistry

Year:

2013

Language:

english

File:

PDF, 1.36 MB

english, 2013

40

The ligand binding mechanism to purine nucleoside phosphorylase elucidated via molecular dynamics and machine learning

Decherchi, Sergio, Berteotti, Anna, Bottegoni, Giovanni, Rocchia, Walter, Cavalli, Andrea

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 2.01 MB

english, 2015

41

Multitarget Compounds for Bipolar Disorder: From Rational Design to Preliminary Pharmacokinetic Evaluation

Di Martino, Rita Maria Concetta, Bottegoni, Giovanni, Seghetti, Francesca, Russo, Debora, Penna, Ilaria, De Simone, Alessio, Ottonello, Giuliana, Mandrup Bertozzi, Sine, Armirotti, Andrea, Bandiera, T

Journal:

Year:

2020

File:

PDF, 1.47 MB

2020

42

Synthesis of Monomeric Derivatives To Probe Memoquin’s Bivalent Interactions

Bolognesi, Maria Laura, Chiriano, GianPaolo, Bartolini, Manuela, Mancini, Francesca, Bottegoni, Giovanni, Maestri, Valentina, Czvitkovich, Stefan, Windisch, Manfred, Cavalli, Andrea, Minarini, Anna, R

Journal:

Journal of Medicinal Chemistry

Year:

2011

Language:

english

File:

PDF, 2.30 MB

english, 2011

43

SERAPhiC: A Benchmark for in Silico Fragment-Based Drug Design

Favia, Angelo D., Bottegoni, Giovanni, Nobeli, Irene, Bisignano, Paola, Cavalli, Andrea

Journal:

Journal of Chemical Information and Modeling

Year:

2011

Language:

english

File:

PDF, 4.76 MB

english, 2011

44

Consistent Improvement of Cross-Docking Results Using Binding Site Ensembles Generated with Elastic Network Normal Modes

Rueda, Manuel, Bottegoni, Giovanni, Abagyan, Ruben

Journal:

Journal of Chemical Information and Modeling

Year:

2009

Language:

english

File:

PDF, 1007 KB

english, 2009

45

A new method for ligand docking to flexible receptors by dual alanine scanning and refinement (SCARE)

Giovanni Bottegoni, Irina Kufareva, Maxim Totrov, Ruben Abagyan

Journal:

Journal of Computer-Aided Molecular Design

Year:

2008

Language:

english

File:

PDF, 751 KB

english, 2008

46

Spin voltage generation through optical excitation of complementary spin populations

Bottegoni, Federico, Celebrano, Michele, Bollani, Monica, Biagioni, Paolo, Isella, Giovanni, Ciccacci, Franco, Finazzi, Marco

Journal:

Nature Materials

Year:

2014

Language:

english

File:

PDF, 1.30 MB

english, 2014

47

A Triazolotriazine‐based Dual GSK‐3β/CK‐1δ Ligand as a Potential Neuroprotective Agent Presenting Two Different Mechanisms of Enzymatic Inhibition

Redenti, Sara, Marcovih, Irene, De Vita, Teresa, Perez, Conception, De Zorzi, Rita, Demitri, Nicola, Perez, Daniel I., Bottegoni, Giovanni, Bisignano, Paola, Bissaro, Maicol, Moro, Stefano, Martinez,

Journal:

Year:

2018

Language:

english

File:

PDF, 2.02 MB

english, 2018

48

Four-Dimensional Docking: A Fast and Accurate Account of Discrete Receptor Flexibility in Ligand Docking

Bottegoni, Giovanni, Kufareva, Irina, Totrov, Maxim, Abagyan, Ruben

Journal:

Journal of Medicinal Chemistry

Year:

2009

Language:

english

File:

PDF, 1.75 MB

english, 2009

49

BACE-1 inhibitors: from recent single-target molecules to multitarget compounds for Alzheimer’s disease

Prati, Federica, Bottegoni, Giovanni, Bolognesi, Maria Laura, Cavalli, Andrea

Journal:

Journal of Medicinal Chemistry

Year:

2017

Language:

english

File:

PDF, 893 KB

english, 2017

50

Combining Dyad Protonation and Active Site Plasticity in BACE-1 Structure-Based Drug Design

Kacker, Puneet, Masetti, Matteo, Mangold, Martina, Bottegoni, Giovanni, Cavalli, Andrea

Journal:

Journal of Chemical Information and Modeling

Year:

2012

Language:

english

File:

PDF, 4.19 MB

english, 2012

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